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Table 3 Parameters for different scenarios

From: Genomic best linear unbiased prediction method including imprinting effects for genomic evaluation

Parameter

Scenario

Base

1

2

3

4

5

6

Ï„

1.0

0.5, 0.75,1.0

1.0

1.0

1.0

1.0

1.0

N i

60

60

20, 60, 100

60

60

60

60

(N m , N f )

(0, 60)

(0, 60)

(0, 60)

(0, 60)

(0, 60), (15, 45),(30, 30)

(0, 60)

(0, 60)

H 2

0.3

0.3

0.3

0.1, 0.3,0.5

0.3

0.3

0.3

N snp

10 000

10 000

10 000

10 000

10 000

2000, 10 000, 50 000

10 000

Paternal and maternal alleles

Known

Known

Known

Known

Known

Known

Known, predicted

  1. Six alternative scenarios were simulated in addition to the base scenario: τ = degree of imprinting; N i  = number of QTL with imprinting; N m and N f  = numbers of QTL silencing paternal and maternal alleles; H 2 = broad-sense heritability; N snp  = number of SNPs.