Table 3 Accuracy obtained with different strategies
From: Sequence- vs. chip-assisted genomic selection: accurate biological information is advised
Method | Number of SNPs* | Number of QTN | |
|---|---|---|---|
20 | 100 | ||
Pedigree BLUP | - | 0.38 (0.09) | 0.43 (0.09) |
RAD | 11,000 | 0.28 (0.10) | 0.27 (0.09) |
Medium-density array | 7,500 | 0.45 (0.09) | 0.45 (0.09) |
High-density array | 17,000 | 0.47 (0.08) | 0.47 (0.08) |
Sequence | 335,000 | 0.49 (0.10) | 0.49 (0.08) |
Causal SNPs | 20/100 | 0.98 (0.01) | 0.95 (0.02) |