Table 4 Common genes identified by the complementary approaches iHS and FST
From: Detection of selection signatures in dairy and beef cattle using high-density genomic information
FST | REHH | Genes |
|---|---|---|
All breeds | Angus | BPIFA4, BPIFB1, DCUN1D4, EPB41L1, LOC100337489, NECAB3, OCIAD1, PRDM5, SCP2, SNTA1 |
Belgian Blue | LOC100848941, UBE3A | |
Charolais | LOC530539, MGC142702, R3HDM1, TPRG1 | |
Hereford | DCUN1D4, FKBP5, FRYL, IMPACT, KCNN2, LNX1, LOC786242, LOC789547, LOC789558, MAML3, OCIAD1, PTK2, SCFD2, SGCB, SPATA18, TTC39C, ZNF521 | |
Holstein-Friesian | ACSF3, ANKRD11, C18H16orf7, CPNE7, FANCA, LOC100299071, LOC100848941, LYN, SPG7, TGS1, TMEM68, UBE3A, XKR4, ZNF276 | |
Limousin | BIN1, COL5A2, HERC2, INPP1, MFSD6, OSGEPL1, PLAG1, PMS1, SDR16C5, SLC40A1, TPRG1 | |
Simmental | CNPY2, DCUN1D4, KIT, LOC530539, MGC142702, OCIAD1, SCFD2 |