Table 3 Significant SNPs for heifer rebreeding with chromosome number, percentage of phenotypic variance explained by the SNP (%PV) and cumulative percentage (%CPV)

BovineHD1000022473

10

1.45

1.45

BovineHD0900024233

9

1.25

2.70

BovineHD1400008910

14

1.08

3.78

BovineHD0300017549

3

1.02

4.80

BovineHD1600009861

16

0.69

5.49

BovineHD1000029156

10

0.55

6.04

BovineHD1300002848

13

0.37

6.41

BovineHD1300010716

13

0.37

6.78

BovineHD2500001186

25

0.35

7.13

BovineHD1400015365

14

0.34

7.47

BovineHD2700003551

27

0.31

7.78

BovineHD1600009851

16

0.3

8.08

BovineHD2000003210

20

0.27

8.35

BovineHD2200012027

22

0.26

8.61

BovineHD2300006979

23

0.25

8.86

BovineHD2000003214

20

0.24

9.10

BovineHD1300003397

13

0.22

9.32

BovineHD1300010715

13

0.22

9.54

BovineHD2700012809

27

0.21

9.75

BovineHD1400008946

14

0.19

9.94

BovineHD0900024387

9

0.17

10.11

BovineHD1300003401

13

0.16

10.27

BovineHD0900024630

9

0.15

10.42

BovineHD2000003208

20

0.15

10.57

BovineHD2700001047

27

0.09

10.66

BovineHD0800023325

8

0.08

10.74

BovineHD0900024229

9

0.08

10.82

BovineHD1000029149

10

0.08

10.9

BovineHD0700027122

7

0.07

10.97

BovineHD0300004387

3

0.05

11.02

BovineHD0400020154

4

0.05

11.07

BovineHD1000027195

10

0.05

11.12

BovineHD1800012552

18

0.05

11.17

BovineHD1000027196

10

0.04

11.21

BovineHD2500000286

25

0.04

11.25

BovineHD0200019275

2

0.03

11.28

BovineHD2000003968

20

0.03

11.31

BovineHD1100007588

11

0.02

11.33

BovineHD0300002153

3

0.01

11.34

BovineHD0400035711

4

0.01

11.35

BovineHD2100018913

21

0

11.35

BovineHD2300008276

23

0

11.35