Genomic inbreeding coefficients based on the distribution of the length of runs of homozygosity in a closed line of Iberian pigs

Table 3 Correlations between pairs of chromosomal genomic inbreeding coefficients and length (number of SNPs per chromosome)

	Length	F _Mol	F _ROH	F _ROH-KS	F _ROH-Q	F ^m_ROH-E	F ^p_ROH-E
Length		0.04	0.16	0.57	0.84	0.57	0.57
F _Mol	0.25		0.45	0.01	−0.07	0.44	0.45
F _ROH	0.25	0.25		0.32	0.13	0.51	0.52
F _ROH-KS	0.21	0.25	0.24		0.60	0.83	0.82
F _ROH-Q	0.14	0.25	0.25	0.20		0.59	0.58
F ^m_ROH-E	0.20	0.22	0.21	0.14	0.20		0.99
F ^p_ROH-E	0.21	0.22	0.21	0.14	0.20	0.00

Correlations are on the upper diagonal; approximate standard errors are on the lower diagonal; F _ROH-KS , F _ROH-Q, F ^m_ROH-E , and F ^p_ROH-E were computed for a minimum of five SNPs and measured as physical distance in Mb; quantiles in F _ROH-Q were computed excluding the chromosome being tested from the reference population; F ^p_ROH-E were computed for a threshold of T = 5 Mb

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