Table 2 Summary of haplotype blocks for each population studied
Breed | Nb of blocks | Total block length (Mb) | Proportion of chromosome length in blocks (%) | Mean block length (kb) | Median block length (kb) | Maximum block length (kb) (OAR) | Minimum block length (kb) (OAR) | Total nb of SNPs in blocks | % of SNPs in blocks | Min/max nb of SNPs in a block |
|---|---|---|---|---|---|---|---|---|---|---|
BL | 2511 | 177.74 | 7.25 | 70.78 | 15.89 | 499.13 (21) | 1.95 (12) | 7354 | 15.13 | 2/12 |
PD | 2534 | 130.53 | 5.32 | 51.51 | 14.96 | 495.61 (10) | 1.04 (26) | 6769 | 13.93 | 2/10 |
MER | 2048 | 42.31 | 1.73 | 20.06 | 12.7 | 493.36 (10) | 0.06 (5) | 4090 | 8.4 | 2/8 |
BxM | 1581 | 33.73 | 1.37 | 21.34 | 12.65 | 493.36 (10) | 1.95 (12) | 3451 | 7.10 | 2/8 |
BxMxP | 1810 | 40.17 | 1.64 | 22.19 | 12.72 | 493.36 (10) | 1.95 (12) | 4011 | 8.25 | 2/9 |