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Table 1 Significant SNPs identified in the association analysis using GenABEL

From: Genome-wide association reveals QTL for growth, bone and in vivo carcass traits as assessed by computed tomography in Scottish Blackface lambs

 

Chromosome

Position

p Valuea

Bone area at the ischium

 OAR6_40855809

6

36655091

2.63E-09

 OAR6_40277406

6

36073405

4.66E-09

 OAR6_40311379

6

36104954

5.19E-09

 DU178311_404

6

36839547

4.58E-08

 OAR6_42576838

6

38310652

9.24E-08

 OAR6_40955920

6

36750972

3.52E-07

 OAR6_45662944

6

40975597

9.51E-07

 OAR6_45285663

6

40594243

1.53E-06

 s71628

6

29009593

1.59E-06

 OAR6_41558126

6

37334387

2.36E-06

 OAR6_41424992

6

37203894

4.43E-06

 OAR1_50287726

1

48393355

1.02E-05

 OAR6_32516276

6

28676510

1.12E-05

 OAR6_43292772

6

38906528

1.57E-05

 OAR6_37176737

6

33197652

1.69E-05

Bone weight

 OAR6_40855809

6

36655091

5.55E-08

 OAR6_40277406

6

36073405

1.12E-06

 OAR6_40311379

6

36104954

1.46E-06

 OAR6_41558126

6

37334387

5.75E-06

 OAR6_37176737

6

33197652

1.49E-05

 OAR6_45662944

6

40975597

2.06E-05

 OAR6_41424992

6

37203894

2.16E-05

 s17946

6

37164263

2.34E-05

Fat area at the 8th thoracic vertebra accounting for live weight

 OAR6_40955920

6

36750972

3.37E-06

 DU178311_404

6

36839547

3.43E-06

 OAR6_40311379

6

36104954

4.94E-06

 OAR6_40277406

6

36073405

5.57E-06

Fat weight accounting for live weight

 DU178311_404

6

36839547

1.23E-06

 OAR6_40311379

6

36104954

4.37E-06

 OAR6_40277406

6

36073405

4.38E-06

 OAR6_40855809

6

36655091

1.16E-05

 OAR6_40955920

6

36750972

1.65E-05

 OAR6_42576838

6

38310652

2.10E-05

Muscle density at the 8th thoracic vertebra

 s66995

1

275593974

7.28E-07

 s45224

1

275482364

4.50E-06

 s45240

16

5438002

1.26E-05

Killing out percentage

 DU178311_404

6

36839547

1.61E-05

Bone proportion

 s75746

3

69399949

3.89E-06

  1. aThe genome-wide significance threshold corresponded to a p value less than 1.24 × 10−6 and the suggestive significance threshold corresponded to a p value less than 2.48 × 10−5