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Table 1 Significant SNPs identified in the association analysis using GenABEL

From: Genome-wide association reveals QTL for growth, bone and in vivo carcass traits as assessed by computed tomography in Scottish Blackface lambs

  Chromosome Position p Valuea
Bone area at the ischium
 OAR6_40855809 6 36655091 2.63E-09
 OAR6_40277406 6 36073405 4.66E-09
 OAR6_40311379 6 36104954 5.19E-09
 DU178311_404 6 36839547 4.58E-08
 OAR6_42576838 6 38310652 9.24E-08
 OAR6_40955920 6 36750972 3.52E-07
 OAR6_45662944 6 40975597 9.51E-07
 OAR6_45285663 6 40594243 1.53E-06
 s71628 6 29009593 1.59E-06
 OAR6_41558126 6 37334387 2.36E-06
 OAR6_41424992 6 37203894 4.43E-06
 OAR1_50287726 1 48393355 1.02E-05
 OAR6_32516276 6 28676510 1.12E-05
 OAR6_43292772 6 38906528 1.57E-05
 OAR6_37176737 6 33197652 1.69E-05
Bone weight
 OAR6_40855809 6 36655091 5.55E-08
 OAR6_40277406 6 36073405 1.12E-06
 OAR6_40311379 6 36104954 1.46E-06
 OAR6_41558126 6 37334387 5.75E-06
 OAR6_37176737 6 33197652 1.49E-05
 OAR6_45662944 6 40975597 2.06E-05
 OAR6_41424992 6 37203894 2.16E-05
 s17946 6 37164263 2.34E-05
Fat area at the 8th thoracic vertebra accounting for live weight
 OAR6_40955920 6 36750972 3.37E-06
 DU178311_404 6 36839547 3.43E-06
 OAR6_40311379 6 36104954 4.94E-06
 OAR6_40277406 6 36073405 5.57E-06
Fat weight accounting for live weight
 DU178311_404 6 36839547 1.23E-06
 OAR6_40311379 6 36104954 4.37E-06
 OAR6_40277406 6 36073405 4.38E-06
 OAR6_40855809 6 36655091 1.16E-05
 OAR6_40955920 6 36750972 1.65E-05
 OAR6_42576838 6 38310652 2.10E-05
Muscle density at the 8th thoracic vertebra
 s66995 1 275593974 7.28E-07
 s45224 1 275482364 4.50E-06
 s45240 16 5438002 1.26E-05
Killing out percentage
 DU178311_404 6 36839547 1.61E-05
Bone proportion
 s75746 3 69399949 3.89E-06
  1. aThe genome-wide significance threshold corresponded to a p value less than 1.24 × 10−6 and the suggestive significance threshold corresponded to a p value less than 2.48 × 10−5