A genome-wide association study for genetic susceptibility to Mycobacterium bovis infection in dairy cattle identifies a susceptibility QTL on chromosome 23

Table 5 Top 20 IBD haplotype blocks shared between sires with a high daughter prevalence of bTB infection

Chr^a	Start SNP	End SNP	Start position	End position	High prop	Low prop
13	BovineHD1300014366	BovineHD1300014692	49589499	51444238	0.54	0.12
13	BovineHD1300013610	BovineHD1300014364	46502709	49576039	0.52	0.12
7	BovineHD0700014051	BovineHD0700014305	48615285	49344575	0.52	0.15
7	BovineHD0700014306	BovineHD0700015867	49347339	54833963	0.50	0.18
13	BovineHD1300013374	BovineHD1300013492	45829062	46168983	0.47	0.14
7	BovineHD0700019982	BovineHD0700020720	68220084	70459483	0.45	0.10
7	BovineHD0700013664	BovineHD0700014049	47130142	48606465	0.43	0.14
3	BovineHD4100002136	BovineHD0300018020	56353864	60108292	0.41	0.09
9	BovineHD0900024988	BovineHD4100007649	88657158	90474884	0.41	0.10
13	BovineHD1300014695	BovineHD1300016474	51460099	57393129	0.41	0.11
7	BovineHD0700019273	BovineHD0700019979	66064958	68207807	0.41	0.09
7	BovineHD0700015911	BovineHD0700016486	55087353	57559898	0.40	0.17
7	ARS-BFGL-NGS-33898	BovineHD0700033819	65520210	66054838	0.40	0.09
7	BovineHD0700020722	BovineHD0700021987	70463539	74679215	0.38	0.09
3	BovineHD0300018022	BovineHD0300018594	60114338	61974915	0.38	0.09
7	BovineHD4100006127	BovineHD0700019111	63918463	65517703	0.38	0.09
3	BovineHD0300024252	BovineHD0300024614	84878201	86233867	0.38	0.17
13	BovineHD1300011097	BovineHD1300012983	38486971	44519866	0.38	0.13
23	BovineHD2300001843	BovineHD2300002752	7308515	11189811	0.38	0.09

The percentages of each IBD block in the high bTB and low bTB groups are represented by the high prop and low prop groups, respectively
^aChromosome

ISSN: 1297-9686