Fig. 1
From: Genome-wide prediction using Bayesian additive regression trees
Manhattan plots of the penalized regression coefficients from the LASSO, BLASSO, GBLUP and RKHS methods, VIMP (percent decrease in MSE) for RF, VIP (average number of node splits per iteration) for BART from the analyses of the original QTLMAS2010 dataset. Dotted lines delimit chromosomes; the major additive genetic effects on chromosome 3 are indicated by magenta circles and the epistatic loci on chromosome 1 by blue diamonds