From: Sparse single-step method for genomic evaluation in pigs
Scenario | Cor all | Cor genotyped | PCG iterations | Sparsity of \(({\mathbf{G}}_{\varvec{ }}^{ - 1} - {\mathbf{A}}_{22}^{ - 1}\)) |
---|---|---|---|---|
NormalGa | 1 | 1 | 301 | 0.0Â % |
Random10b | 0.993 | 0.981 | 309 | 76.9Â % |
Unrelated10c | 0.968 | 0.944 | 412 | 77.4Â % |
Offspring10d | 0.996 | 0.985 | 298 | 78.5Â % |
OffspringRandom10e | 0.997 | 0.989 | 287 | 78.1Â % |
Random30b | 0.999 | 0.997 | 306 | 46.5Â % |
Random50b | 1.000 | 0.999 | 284 | 23.7Â % |
Old10f | 0.947 | 0.939 | 405 | 77.7Â % |
Young10g | 0.963 | 0.934 | 370 | 76.1Â % |
NormalAh | 0.965 | 0.901 | 320 | – |