From: Sparse single-step method for genomic evaluation in pigs
Scenario | Cor all | Cor genotyped | PCG iterations | Sparsity of \(({\mathbf{G}}_{ }^{ - 1} - {\mathbf{A}}_{22}^{ - 1}\)) |
---|---|---|---|---|
NormalGa | 1 | 1 | 306 | 0.0Â % |
Random10b | 0.995 | 0.977 | 377 | 80.1Â % |
Unrelated10c | 0.982 | 0.954 | 492 | 79.9Â % |
Offspring10d | 0.987 | 0.983 | 330 | 80.4Â % |
OffspringRandom10e | 0.991 | 0.984 | 340 | 80.3Â % |
Random30b | 0.997 | 0.996 | 346 | 48.4Â % |
Random50b | 0.996 | 0.999 | 312 | 24.7Â % |
Old10f | 0.944 | 0.936 | 463 | 80.1Â % |
Young10g | 0.897 | 0.937 | 444 | 79.7Â % |
NormalAh | 0.977 | 0.858 | 321 | – |