Table 6 SNP Allele frequencies (%) for the SNP associated with CVA1 for BTA13
From: Use of canonical discriminant analysis to study signatures of selection in cattle
Marker | r a(SNP, CVA1) | Breed | A | C | G | T |
|---|---|---|---|---|---|---|
BTB-01997512 | 0.78973 | BRW | 0.08 | 0.92 | ||
HOL | 0.84 | 0.16 | ||||
MAR | 0.12 | 0.88 | ||||
SIM | 0.14 | 0.86 | ||||
PIE | 0.22 | 0.78 | ||||
ARS-BFGL-NGS-3711 | 0.73262 | BRW | 0.05 | 0.95 | ||
HOL | 0.82 | 0.18 | ||||
MAR | 0.15 | 0.85 | ||||
SIM | 0.34 | 0.66 | ||||
PIE | 0.43 | 0.57 | ||||
Hapmap39323-BTA-32823 | 0.67370 | BRW | 0.99 | 0.01 | ||
HOL | 0.48 | 0.52 | ||||
MAR | 1.00 | 0.00 | ||||
SIM | 0.97 | 0.03 | ||||
PIE | 0.98 | 0.02 | ||||
Hapmap31215-BTA-32775 | 0.67348 | BRW | 0.99 | 0.01 | ||
HOL | 0.43 | 0.57 | ||||
MAR | 0.97 | 0.03 | ||||
SIM | 0.90 | 0.10 | ||||
PIE | 0.85 | 0.15 | ||||
BTB-01718516 | 0.65564 | BRW | 0.98 | 0.02 | ||
HOL | 0.02 | 0.98 | ||||
MAR | 0.90 | 0.10 | ||||
SIM | 0.40 | 0.60 | ||||
PIE | 0.42 | 0.58 | ||||
Hapmap53245-rs29026914 | 0.65456 | BRW | 0.15 | 0.85 | ||
HOL | 0.80 | 0.20 | ||||
MAR | 0.26 | 0.74 | ||||
SIM | 0.30 | 0.70 | ||||
PIE | 0.39 | 0.61 |