|
Categoryb
|
YNLC
|
|---|
|
Upstream
|
186,263
|
|
Exonic
|
|
Stop gain
|
379
|
|
Stop loss
|
51
|
|
Synonymous
|
126,014
|
|
Non-synonymous
|
51,933
|
|
Intronic
|
5,098,263
|
|
Splicing
|
510
|
|
Downstream
|
163,867
|
|
Upstream/downstream
|
6747
|
|
Intergenic
|
7,515,849
|
-
aYNLC: Xishuangbanna fighting chicken
-
bUpstream: a variant that is located in the 1-kb region upstream of the gene start site; stop gain: a non-synonymous (ns) SNP that leads to the creation of a stop codon at the variant site; stop loss: a non-synonymous SNP that leads to the elimination of a stop codon at the variant site; splicing: a variant within 2 bp of a splice junction; downstream: a variant that is located in the 1-kb region downstream of the gene end site; upstream/downstream: a variant that is located in the downstream and upstream regions of two genes
