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Table 1 Regression coefficient of adjusted phenotype on estimated breeding values for backfat (BFT), carcass weight (CWT), eye-muscle area (EMA) and marbling (MAR) traits

From: Comparison of alternative approaches to single-trait genomic prediction using genotyped and non-genotyped Hanwoo beef cattle

Prediction methods

Trait

BFT

CWT

EMA

MAR

SSBR-C (π estimation)

0.85

0.97

0.99

0.88

SSBR-B (π = chosen)a

0.88

1.08

1.07

0.74

SSBR-C (π = chosen)b

0.88

1.02

1.04

0.89

SSBR-C (π = 0)

0.86

1.21

1.00

0.87

BayesC (π estimation)

0.82

1.05

1.05

0.86

BayesB (π = chosen)a

0.82

1.03

1.26

0.70

BayesC (π = chosen)b

0.88

1.06

1.12

0.87

BayesC (π = 0)

0.86

1.20

1.09

0.88

SSGBLUP-I

0.73

1.15

0.97

0.79

SSGBLUP-II

0.54

0.84

0.75

0.64

SSGBLUP-III

0.52

0.90

0.79

0.61

PBLUP

0.76

1.12

1.02

0.93

PBLUP-G

0.61

1.33

1.30

0.92

  1. aChosen π of BayesB and SSBR-B for BFT, CWT, EMA and MAR were 0.95, 0.98, 0.95 and 0.6, respectively
  2. bChosen π of BayesC and SSBR-C for BFT, CWT, EMA and MAR were 0.98, 0.9999, 0.98 and 0.6, respectively