Skip to main content

Table 3 Numbers of clusters, chromosomal positions, and numbers of significant SNPs for the traits APD and APR

From: A genome-wide association study in a large F2-cross of laying hens reveals novel genomic regions associated with feather pecking and aggressive pecking behavior

Trait

Cluster number

Chr

Start/end position in bp 3 Mbp interval

Length in Mb

Number of SNPs p ≤ 5 × 10−5

Number of SNPs \(p_{genome - wide} \le 0.05\)

APD

1

1

64,103,417–67,037,983

2.93

3

0

 

2

1

116,041,775–117,435,846

1.39

6

2

 

3

2

83,445,347–86,114,050

2.67

2

0

 

4

4

33,821–552,165

0.52

7

0

 

5

5

56,835,282–58,214,037

1.38

6

2

 

6

18

8135,718–101,911,44

2.06

11

0

 

7

21

504,778–3009,557

2.50

7

0

APR

1

7

6241,588–6327,771

0.09

3

0

 

2

7

9746,560–12,631,641

2.89

10

0

 

3

7

13,378,513–14,679,901

1.30

5

0

  1. Chr Chromosome
  2. Significance level p ≤ 5 × 10−5 and p genome-wide  ≤ 0.05