Unveiling genomic regions that underlie differences between Afec-Assaf sheep and its parental Awassi breed

Table 2 Variable genomic regions detected in Awassi and Afec-Assaf sheep according to both PLINK and EMMAX analyses

Variable genomic region number	OAR number	Region position (Mb)	PLINK - Peak SNP position (Mb)	EMMAX -Peak SNP position (Mb)	PLINK F _st	EMMAX P value
1	1	2.72	2,721,556		0.61	1.0e−07
2		99.83–101.28	99,832,319		0.65	5.4e−08
3		103.40–103.45	103,452,513		0.60	2.5e−08
4		164.60	164,604,667		0.59	6.7e−07
5		266.24	266,241,278		0.55	5.3e−07
6	2	83.11–84.53	83,214,641	84,054,194	0.59	1.0e−05
7	2	145.65–148.41	148,406,594	145,648,041	0.68	3.9e−07
8	3	134.23–134.49	134,234,489		0.66	6.7e−07
9	6	20.99–24.00	22,323,737		0.66	5.1e−08
10		24.97–32.04	26,058,630		0.73	1.8e−10
11		54.26–55.67	54,261,462		0.55	5.8e−06
12	7	96.99	96,995,379		0.58	2.9e−07
13	8	62.62–62.83	62,735,336		0.57	6.8e−08
14	8	78.36–80.60	78,364,891	80,605,889	0.67	5.2e−09
15	10	27.65–31.64	30,700,853		0.80	8.4e−15
16	10	33.75–36.24	36,238,012	33,752,924	0.66	1.2e−07
17	17	8.13–8.74	8,739,357		0.66	1.9e−06
18	20	37.51	37,515,740		0.57	2.5e−06
19	25	6.65–8.66	7,392,689		0.59	4.7e−08
20	26	36.58	36,580,518		0.58	5.4e−06

ISSN: 1297-9686