
MAF class


0.001–0.01

0.01–0.05

0.05–0.1

0.1–0.2

0.2–0.3

0.3–0.4

0.4–0.5


Expectation VR1^{a}

0.006

0.065

0.079

0.252

0.210

0.194

0.193

Expectation VR2^{a}

0.147

0.186

0.134

0.169

0.132

0.118

0.114

Estimate^{b}

0.059

0.149

0.025

0.053

0.299

0.417

0.002

 All proportions are scaled to sum to 1 across all MAF classes

^{a}Expectations of the proportion of variance explained based on the assumption of VanRaden’s methods 1 (VR1) and 2 (VR2); see [21]

^{b}Estimated proportion of DRP variance explained for feet and legs using the GREMLMS method with partitioning of imputed sequence variants into seven MAF groups