Table 2 Definition of five genetic effects used in simulations to determine if the LER model could locate interacting loci
From: Locally epistatic models for genome-wide prediction and association by importance sampling
Effect | |
|---|---|
\(g_1=(.6*x_{8}+.5*x_{11}-.4*x_{14})\) | |
\(if (pc_1<0) \left[ g_2=.6*x_{208}-.5*x_{211}-.4*x_{214}\right]\) | |
else \(\left[ g_2=-(.6*x_{208}+.5*x_{211}+.4*x_{214})\right]\) | |
\(g_3=(.6*x_{408}+.5*x_{411}-.4*x_{414})^2\) | |
\(if(pc_1<0) \left[ g_4=((.6*x_{608}+.5*x_{611}-.4*x_{614})^2)\right]\) | |
else \(\left[ g_4=(-(.6*x_{608}-.5*x_{611}+.4*x_{614})^2)\right]\) | |
\(if(pc_1<0) \left[ g_5=((.6*x_{808}+.5*x_{811}-.4*x_{814}+.5*pc_2)^2)\right]\) | |
else \(\left[ g_5=((-.6*x_{808}-.5*x_{811}-4*x_{814}+.5*pc_2)^2)\right]\) |