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Table 1 List of breeds and number of animals included in the analysis and methods applied

From: Detection of two non-synonymous SNPs in SLC45A2 on BTA20 as candidate causal mutations for oculocutaneous albinism in Braunvieh cattle

Breed or group

Total

KASPâ„¢

RFLP

Mapping

WGS

Albino-Braunvieh

2

2

2

2

1b

Albino-Braunvieh relativesa

10

10

10

7

–

Braunvieh

327

263

281

51

4c

Original Braunvieh

38

23

24

34

–

Croatian Busha

6

6

6

–

–

BV-crossbred

2

2

2

–

–

Galloway

10

10

10

–

–

Lakenvelder

12

12

12

–

–

Diverse breeds (1000 bull genomes project)

–

–

–

–

1682

Aurochs [26]

–

–

–

–

1

Total

407

328

347

94

1688

  1. Number of animals per breed group, which were used either for mapping candidate haplotypes and/or genotyping of candidate variants by KASPâ„¢ (T444I) and/or RFLP (R45Q)
  2. The last two columns show the numbers of animals, which were used for the initial haplotype-based mapping procedure and for whole-genome sequencing (WGS) analyses
  3. aTwo dams and eight close relatives of the two albino calves sampled on the same farm
  4. bSequenced in this study
  5. cSequenced in a previous study [29] and used for variant calling with SAMtools mpileup