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Table 2 Details on ECA11 candidate non-synonymous SNPs

From: A missense variant in the coil1A domain of the keratin 25 gene is associated with the dominant curly hair coat trait (Crd) in horse

Position (bp)

Ref. allele

Alternate allele

Gene

Protein accession number

Consequence

SIFT

21,891,160

G

A

KRT25

ENSECAP00000011587

p.R89H

Deleterious p = 0.01

21,932,167

G

T

KRT24

ENSECAP00000013915

p.G51C

Tolerated p = 0.05

22,186,465

C

T

TOP2A

ENSECAP00000011684

p.S1088L

Deleterious p = 0.05

22,191,762

G

T

TOP2A

ENSECAP00000011684

p.L1284F

Deleterious p = 0.01