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Table 7 List of ontology terms that were significantly over- and underrepresented in the set of genes located in 1-Mb windows that were associated with more than 3% of genetic variance for at least one temperature-humidity index category comparisons

From: Genome-wide association of changes in swine feeding behaviour due to heat stress

Ontology term

Gene set

Annotated genesa (n = 21,324)

Genesb (n = 44)

Number of genes expected

Over (+) or under (−) represented

p value

Biological process

 None

     

Molecular function

 Glutathione transferase activity

27

5

0.07

+

3.35E−05

 Transferase activity, transferring alkyl or aryl groups

54

5

0.15

+

1.01E−03

Cellular component

 None

     
  1. aNumber of genes in the Sus scrofa 10.2 annotation set with given GO term. Total number of annotated genes in the Sus scrofa 10.2 annotation is in parentheses
  2. bNumber of genes with given GO term located in genomic regions explaining at least 3% of genomic variance for one of more THI comparison GWAS. Total number of annotated genes residing in the selected regions is in parentheses