From: Cross-species inference of long non-coding RNAs greatly expands the ruminant transcriptome
Species 1 (in which lncRNAs are captured by RNA-seq libraries) | Species 2 (in which lncRNA can be inferred) | Number of lncRNA models detected within a region of conserved synteny between species 1 and 2, but not captured by the RNA-seq libraries of species 2 | Number of lncRNA models from species 1 mapped to the genome of species 2 | % of lncRNA models detected by direct genome mapping | Number of intergenic regions in the syntenic blocks conserved between these two species | % of intergenic regions in which a lncRNA from species 1 is inferred in species 2 |
---|---|---|---|---|---|---|
Cattle | Goat | 2593 | 1213 | 46.78 | 5964 | 20.34 |
Human | 163 | 20 | 12.27 | 886 | 2.26 | |
Sheep | 2939 | 1219 | 41.48 | 5854 | 20.82 | |
Goat | Cattle | 2593 | 286 | 11.03 | 5964 | 4.8 |
Human | 76 | 9 | 11.84 | 1054 | 0.85 | |
Sheep | 991 | 164 | 16.55 | 4076 | 4.02 | |
Human | Cattle | 163 | 16 | 9.82 | 886 | 1.81 |
Goat | 76 | 15 | 19.74 | 1054 | 1.42 | |
Sheep | 93 | 18 | 19.35 | 760 | 2.37 | |
Sheep | Cattle | 2939 | 775 | 26.37 | 5854 | 13.24 |
Goat | 991 | 507 | 51.16 | 4076 | 12.44 | |
Human | 93 | 15 | 16.13 | 760 | 1.97 |