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Table 1 Means, standard deviations (SD) for cheese-making properties and milk composition traits in the genotyped population (N = 19,586), and accuracy of MIR predictions equations (R2 val)

From: Sequence-based GWAS, network and pathway analyses reveal genes co-associated with milk cheese-making properties and milk composition in Montbéliarde cows

Trait

Description and unit

Mean

SD

R2 val

Cheese-making propertiesa

 CYFRESH

100 × (g curd/g milk), in %

37.7

4.95

0.82

 CYDM

100 × (g DM curd/g DM milk), in %

66.8

3.31

0.89

 CYFAT-PROT

(g milk fat + g milk protein)/kg curd, in g kg−1

189.7

14.3

0.54

 aPCC

Curd firmness at rennet coagulation time (RCT), in firm index (FI)

18.8

1.72

0.76

 K10/RCTPCC

Curd organization index standardized for RCT

0.37

0.06

0.68

 aSC

Curd firmness at RCT, in FI

18.9

1.80

0.76

 a2SC

Curd firmness at 2 times RCT, in FI

22.8

1.41

0.69

 K10/RCTSC

Curd organization index standardized for RCT

0.37

0.07

0.72

 pH0_PCC

Initial value of pH

6.52

0.04

0.62

Protein composition

 PC

Protein content, in g/100 g milk

3.36

0.20

1.00

 α-LA

α-lactalbumin, in g/100 g protein

4.01

0.20

0.59

 β-LG

β-lactoglobulin, in g/100 g protein

12.4

1.09

0.74

 αs1-CN

αs1-casein, in g/100 g protein

32.2

0.18

0.88

 αs2-CN

αs2-casein, in g/100 g protein

9.73

0.19

0.82

 β-CN

β-casein, in g/100 g protein

29.7

0.68

0.92

 κ-CN

κ-casein, in g/100 g protein

8.74

0.24

0.80

 ΣCN

Total caseins, in g/100 g protein

80.8

0.74

0.98

 ΣWP

Total whey proteins, in g/100 g protein

16.9

1.15

0.54

Fatty acid composition

 FC

Fat content, in g/100 g milk

3.73

0.32

1.00

 SFA

Saturated fatty acids, in g/100 g fat

70.6

3.05

1.00

 MUFA

Mono-unsaturated fatty acids, in g/100 g fat

26.5

2.68

0.97

 UFA

Unsaturated fatty acids, in g/100 g fat

30.0

2.93

0.98

 PUFA

Poly-unsaturated fatty acids, in g/100 g fat

3.33

0.39

0.76

 Σ C4-C10

Sum of C4 to C10 fatty acids, in g/100 g fat

11.6

0.71

0.95

 Σ C4-C12

Sum of C4 to C12 fatty acids, in g/100 g fat

14.2

0.93

0.95

 C14:0

Myristic acid, in g/100 g fat

11.1

1.05

0.94

 C16:0

Palmitic acid, in g/100 g fat

28.8

2.53

0.94

 C18:0

Stearic acid, in g/100 g fat

10.5

1.42

0.84

 C18:1

Oleic acid, in g/100 g fat

23.2

2.59

0.96

Minerals

 Ca

Calcium, in mg/kg milk

1165

69.6

0.82

 P

Phosphorous, in mg/kg milk

1014

62.5

0.75

 Mg

Magnesium, in mg/kg milk

100.9

5.5

0.77

 K

Potassium, in mg/kg milk

1496

69.3

0.68

 Na

Sodium, in mg/kg milk

338.3

29.1

0.44

Other compounds

 Lactose

Lactose, in g/kg milk

49.3

1.4

0.92

 Citrate

Citrate, in g/kg milk

0.83

0.11

0.90

  1. aFor pressed cooked cheese (PCC) and soft cheese (SC)