Table 3 Number of variants and QTL detected in the GWAS and meta-analysis for fat and protein percentage
Analysis | Fat % | prot % | ||||||
|---|---|---|---|---|---|---|---|---|
nS | FDR | nQ | nS/nQ | nS | FDR | nQ | nS/nQ | |
AUSB | 8871 | 1.7 × 10−5 | 56 | 158 | 13,955 | 1.1 × 10−5 | 52 | 268 |
AUSC | 9502 | 1.6 × 10−5 | 74 | 128 | 13,475 | 1.1 × 10−5 | 49 | 275 |
HOLF | 10,124 | 1.4 × 10−5 | 22 | 460 | 11,033 | 1.3 × 10−5 | 35 | 315 |
MON | 3971 | 3.6 × 10−5 | 13 | 305 | 5383 | 2.7 × 10−5 | 19 | 283 |
NOR | 2981 | 4.7 × 10−5 | 11 | 271 | 3379 | 4.1 × 10−5 | 16 | 211 |
NR | 4304 | 3.0 × 10−5 | 30 | 143 | 6231 | 2.1 × 10−5 | 37 | 168 |
HOLG | 9244 | 1.6 × 10−5 | 20 | 462 | 10,102 | 1.5 × 10−5 | 38 | 266 |
BRAU | 2483 | 6.4 × 10−5 | 13 | 191 | 2117 | 7.5 × 10−5 | 9 | 235 |
FLCK | 9492 | 1.8 × 10−5 | 20 | 475 | 5654 | 3.0 × 10−5 | 33 | 171 |
GWAS | 31,559 | – | 124 | 255 | 42,518 | – | 104 | 409 |
META | 27,820 | 9.2 × 10−6 | 138 | 202 | 44,095 | 5.8 × 10−6 | 176 | 251 |