Table 3 Dimensionality of different genomic relationship matrices
From: Theoretical and empirical comparisons of expected and realized relationships for the X-chromosome
Statistic | X-chromosome | BTA2 | Autosomes |
|---|---|---|---|
Number of positive SV | 5921 | 5693 | 6085 |
Number of SV accounting for 90% of total | 15 | 24 | 105 |
Number of SV accounting for 95% of total | 25 | 39 | 250 |
Number of SV accounting for 99% of total | 53 | 85 | 793 |
Number of SV accounting for 99.9% of total | 122 | 191 | 1977 |
Proportion of correlations > 0.90 | 1.0e−4 | 1.7e−6 | 1.1e−7 |
Proportion of correlations > 0.95 | 5.4e−5 | 5.4e−7 | 1.1e−7 |
Proportion of correlations > 0.99 | 3.4e−5 | 2.7e−7 | 1.1e−7 |
Proportion of correlations > 0.90 (males only) | 1.6e−3 | 4.9e−6 | 0 |
Proportion of correlations > 0.95 (males only) | 1.1e−3 | 0 | 0 |
Proportion of correlations > 0.99 (males only) | 8.9e−4 | 0 | 0 |