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Table 2 Transcription factors that were enriched in the QTL regions on chromosomes (Chr) 9 and 12 with their start and end position on the chromosome

From: Genomic regions and signaling pathways associated with indicator traits for feed efficiency in juvenile Atlantic salmon (Salmo salar)

Transcription factor Gene ID Chr Start End ALCa ALNb
b1 q b1 q
Steroid hormone receptor ERR2-like LOC106611051 9 22198787 22262832 − 0.08 0.45 − 0.26 0.02
Hepatocyte nuclear factor 3-alpha-like LOC106611236 9 34548245 34551243 − 0.09 0.03 − 0.04 0.65
Uncharacterized LOC106611247 LOC106611247 9 35172348 35208430 − 0.05 0.34 − 0.12 0.03
Forkhead box protein N3-like LOC106611366 9 42014771 42135841 − 0.07 0.57 − 0.27 0.03
Gastrula zinc finger protein XlCGF26.1-like LOC106612579 9 106204316 106211994 − 0.13 0.02 − 0.09 0.29
Transcription factor SOX-4-like LOC106565395 12 52077963 52084651 − 0.26 0.04 − 0.33 0.06
Interferon regulatory factor 6-like LOC106565674 12 59247924 59255854 − 0.17 0.00 − 0.14 0.06
  1. aAtom % 13C liver (ALC)
  2. bAtom % 15N liver (ALN)
  3. b1 is the fixed regression coefficient of the phenotype for the trait (ALC or ALN) and q is the false discovery rate (Benjamini–Hochberg corrected)
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Genetics Selection Evolution

ISSN: 1297-9686