Chr | Position | Tag variant ID | N of hits | Top wvn (cm−1) | Iter | P-value | Protein coding variant ID | LD | Gene | Impact | Description |
---|---|---|---|---|---|---|---|---|---|---|---|
3 | 7908611 | rs137763930 | 11 | 940 | 1 | 6.7e−20 | rs110560331 | 0.976 | FCRLA | L | c.233-3 T > C |
3 | 7931694 | rs211402696 | 20 | 1462 | 2 | 1.2e−23 | rs381714237 | 0.989 | FCGR2B | H | c.899dupC |
3 | 15411459 | rs134900385 | 6 | 1022 | 1 | 4.3e−19 | rs382689947 | 0.994 | FAM189B | M | c.1237 T > C |
3 | 15411459 | rs134900385 | 6 | 1022 | 1 | 4.3e−19 | rs134844772 | 0.990 | GBA | M | c.1080C > A |
3 | 15411459 | rs134900385 | 6 | 1022 | 1 | 4.3 e−19 | rs132659643 | 0.999 | HCN3 | M | c.1699A > G |
3 | 15411459 | rs134900385 | 6 | 1022 | 1 | 4.3e−19 | rs109330809 | 0.990 | MTX1 | L | c.508-6 T > C |
3 | 15517871 | rs109328483 | 6 | 1007 | 1 | 4.4e−19 | rs136761456 | 0.992 | SCAMP3 | M | c.151G > C |
3 | 15517871 | rs109328483 | 6 | 1007 | 1 | 4.4e−19 | rs43706482 | 0.994 | THBS3 | L | c.2075-3 T > C |
3 | 15550598 | rs380597285 | 327 | 1462 | 0 | 1.3e−54 | rs109816684 | 0.994 | SLC50A1 | L | c.282 + 7G > A |
5 | 75729880 | rs384734208 | 50 | 1466 | 1 | 5.0e−47 | rs207628090 | 0.930 | CSF2RB | M | c.41 T > C |
5 | 75758989 | rs210094995 | 2 | 1447 | 0 | 5.8e−40 | rs210937722 | 0.926 | NCF4 | M | c.841G > C |
5 | 118246868 | rs136859160 | 308 | 1261 | 0 | 3.0e−44 | rs456403270 | 0.937 | TBC1D22A | M | c.1063C > T |
6 | 38027010 | rs43702337 | 455 | 1119 | 0 | 7.3e−948 | rs43702337 | 1 | ABCG2 | M | c.1742A > C |
6 | 87181619 | rs43703011 | 17 | 3633 | 2 | 2.5e−22 | rs43703011 | 1 | CSN2 | M | c.245C > A |
6 | 87274397 | rs378808772 | 3 | 1283 | 2 | 9.9e−51 | rs43703010 | 0.974 | CSN1S1 | M | c.620A > G |
6 | 87390576 | rs43703015 | 18 | 1473 | 1 | 4.0e−108 | rs43703015 | 1 | CSN3 | M | c.470 T > C |
11 | 103304757 | rs109625649 | 329 | 1593 | 0 | 1.2e−134 | rs109625649 | 1 | PAEP | M | c.401 T > C |
11 | 104242578 | rs207688357 | 11 | 1462 | 0 | 5.5e−33 | rs207688357 | 1 | ABO | H | c.233 + 1G > C |
12 | 69612955 | rs383509255 | 132 | 1716 | 0 | 6.4e−45 | rs208744187 | 0.950 | TGDS | M | c.204A > C |
14 | 1726650 | rs133611586 | 6 | 3514 | 1 | 1.6e−75 |  | 0.992 | WDR97 | L | c.2656-5_2656-4insG |
14 | 1732043 | rs437406031 | 384 | 2846 | 1 | 6.3e−42 | rs450710918 | 0.990 | ENS..39978 | M | c.352G > A |
14 | 1732043 | rs437406031 | 384 | 2846 | 1 | 6.3e−42 | rs476736066 | 0.997 | MROH1 | M | c.3549G > C |
14 | 1755742 | rs384226556 | 5 | 2656 | 0 | 4.0e−20 | rs209542297 | 0.9998 | CPSF1 | L | c.4287 T > C |
14 | 1802265 | rs109234250 | 310 | 1716 | 0 | 1.5e−2607 | rs109234250 | 1 | DGAT1 | M | c.694G > A |
14 | 1802265 | rs109234250 | 310 | 1716 | 0 | 1.5e−2607 | rs134364612 | 0.999 | SLC52A2 | M | c.724A > G |
14 | 66328304 | rs446084949 | 19 | 1029 | 1 | 2.7e−20 | rs446084949 | 1 | SPAG1 | M | c.2044G > A |
15 | 28347165 | rs210034037 | 5 | 1537 | 0 | 7.7e−35 | rs208325660 | 0.999 | RNF214 | M | c.314G > A |
15 | 53940444 | rs382926661 | 23 | 1205 | 1 | 4.2e−19 | rs380220394 | 0.993 | DNAJB13 | L | c.69-4 T > C |
16 | 24977696 | rs111027377 | 62 | 2742 | 2 | 4.8e−25 | rs109896036 | 0.988 | MTARC1 | L | c.628-5C > T |
16 | 24977696 | rs111027377 | 62 | 2742 | 2 | 4.8e−25 | rs110899826 | 0.988 | MTARC1 | M | c.581C > G |
19 | 42428366 | rs209808022 | 4 | 1250 | 1 | 3.1e−25 | rs209302038 | 0.991 | KRT9 | M | c.196C > T |
19 | 42488389 | rs379667889 | 8 | 1447 | 0 | 7.8e−34 | rs209756857 | 0.969 | KRT42 | L | c.57 + 7C > T |
19 | 42488389 | rs379667889 | 8 | 1447 | 0 | 7.8e−34 | rs383013355 | 0.963 | KRT16 | M | c.896A > G |
19 | 42488389 | rs379667889 | 8 | 1447 | 0 | 7.8e−34 | rs208923483 | 0.966 | KRT17 | M | c.146G > C |
19 | 42488389 | rs379667889 | 8 | 1447 | 0 | 7.8e−34 | rs385937063 | 0.966 | KRT17 | L | c.1233C > T |
19 | 43036265 | rs210324533 | 11 | 1029 | 1 | 5.3e−43 | rs207799702 | 0.944 | KAT2A | L | c.700-7C > G |
19 | 43036265 | rs210324533 | 11 | 1029 | 1 | 5.3e−43 | rs209410283 | 0.945 | KCNH4 | M | c.408C > G |
19 | 43036265 | rs210324533 | 11 | 1029 | 1 | 5.3e−43 | rs377779402 | 0.945 | KCNH4 | H | c.2663 + 2 T > C |
19 | 43053995 | rs481837688 | 24 | 1212 | 1 | 6.6e−26 | rs481837688 | 1 | STAT5A | M | c.2305C > A |
19 | 51303887 | rs41921224 | 65 | 1499 | 0 | 1.9e−35 | rs41921160 | 0.993 | CCDC57 | M | c.1907 T > C |
19 | 57087981 | rs41920620 | 6 | 1216 | 0 | 1.8e−21 | rs469721022 | 0.999 | HID1 | L | c.1147-7G > C |
28 | 6559147 | rs133101552 | 3 | 1261 | 0 | 8.6e−23 | rs133101552 | 1 | KCNK1 | M | c.934C > A |
29 | 41821270 | rs207854419 | 14 | 1257 | 1 | 4.6e−30 | rs384900272 | 0.998 | NXF1 | M | c.1555G > A |