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Table 8 Results of the sequence homology analysis for all the variants with r2 ≥ 0.7 from linkage disequilibrium analysis

From: A major QTL at the LHCGR/FSHR locus for multiple birth in Holstein cattle

Variant on chromosome 11a

Homolog region for human genomeb

r2c

Homology scored

31,246,990AGCC>-

2:48,957,377

0.707

0.071

31,089,325C>G

2:48,806,473

0.856

0

31,216,357C>T

2:48,930,243

0.705

0

31,248,462G>A

2:48,957,970

0.720

0

31,248,573C>T

2:48,957,971

0.706

0

31,248,580G>T

2:48,957,971

0.706

0

  1. aBased on the cattle assembly ASR-UCD1.2/bosTau9
  2. bUsing the USCS genome browser and human assembly GRCh38/hg38
  3. cFrom a previous linkage disequilibrium analysis with top-associated haplotype
  4. dSequence homology between 20 mammalian species using the UCSC genome browser, score range from 0 to 1