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Table 2 Eight large putative assembly errors in autosomes of the ARS1 assembly as compared with the Saanen_v1 assembly

From: A near complete genome for goat genetic and genomic research

Name Position in Saanen_v1 Position in ARS1 Length (bp) Description
Region 1 5:99,084,275–101,783,455 5:98,973,162–101,785,323 2,812,161 Inverted
Region 2 7:9,511,868–14,628,369 7:9,353,868–13,740,007 4,386,139 Inverted
Region 3 11:103,733,339–106,912,333 11:103,232,270–106,224,990 2,992,720 Inverted
Region 4 17:61,267–2,700,348 17:0–2,620,773 2,620,773 Inverted
Region 5 18:14,220,403–20,470,517 18:16,211,458–22,469,539 6,258,081 Inverted
Region 6 23:33,110,782–35,437,285 18:0–1,987,427 1,987,427 Incorrectly placed
Region 7 23:48,920,741–50,832,698 23:32,018,169–33,927,923 1,909,754 Incorrectly placed
Region 8 25:40,139–1,085,452 25:34,034,345–35,098,278 1,063,933 Incorrectly placed