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Table 5 Genome-widea and suggestive significant SNPs associated with animal resilience to temperature change in hot weather and lifetime milk yield

From: A comprehensive genome-wide scan detects genomic regions related to local adaptation and climate resilience in Mediterranean domestic sheep

Phenotype

Chr

SNP

Position (bp)

MAF

Beta coefficient (SE)

P-value

Resilience to hot weather

5

OAR5_38936884.1

35176238

0.32

 − 0.005 (0.001)

1.15E−06

OAR5_40288441.1

36496751

0.45

 − 0.004 (0.001)

9.92E−06

OAR5_41355579.1

37587760

0.34

 − 0.004 (0.001)

1.17E−05

s46299.1

36569778

0.32

 − 0.004 (0.001)

1.20E−05

OAR5_40166532_X.1

36373243

0.46

 − 0.004 (0.001)

1.98E−05

19

s14444.1

18983777

0.12

0.007 (0.002)

1.85E−05

Lifetime milk yield

19

s14444.1a

18983777

0.12

 − 141.249 (28.432)

9.17E−07

  1. Chr chromosome, MAF minor allele frequency, Beta coefficient substitution effect, σ2A(SNP) proportion of additive genetic variance attributed to detected SNPs
  2. a: additive genetic effect and d: dominance effect (significantly different from zero (P < 0.05) are indicated with double asterisk); SE: standard error
  3. The respective chromosomal locations refer to the Oar v4.0 genome assembly