Fig. 3
From: Optimisation of the core subset for the APY approximation of genomic relationships
Visualisation of PCA and UMAP for genotyped animals in simulation. Projection of genomic relationships into the first two dimensions was done with Principal Components Analysis (PCA) or with Uniform Manifold Approximation and Projection (UMAP). The percentage of variation captured by each principal component is shown in parentheses. Colours represent five different generations of genotyped animals in simulation