Table 4 Significant SNPs from the genome-wide association studies of dairy traits
From: Host genetic control on rumen microbiota and its impact on dairy traits in sheep
Trait | SNP name | OAR | Position (bp) | Var (%) | − log10(P value) |
|---|---|---|---|---|---|
α-Lactalbumin | rs426734075 | 1 | 147,595,299 | 0.06 | 4.79 |
α-Lactalbumin | rs400013895 | 2 | 25,181,840 | 0.11 | 4.41 |
α-Lactalbumin | rs421261402 | 2 | 58,918,403 | 0.23 | 4.63 |
C8:0 | rs415371608 | 2 | 117,736,662 | 0.03 | 5.67 |
α-Lactalbumin | rs418593908 | 5 | 103,652,938 | 0.04 | 5.03 |
αS2-CN | rs423428584 | 6 | 81,218,896 | 0.20 | 8.18 |
α-Lactalbumin | rs409523937 | 6 | 100,115,861 | 0.22 | 5.94 |
α-Lactalbumin | rs399440927 | 11 | 32,011,837 | 0.46 | 4.43 |
α-Lactalbumin | rs429602859 | 11 | 32,652,804 | 1.05 | 5.12 |
α-Lactalbumin | rs412766461 | 11 | 32,783,984 | 1.03 | 4.89 |
α-Lactalbumin | rs410865757 | 11 | 33,302,950 | 1.97 | 5.40 |
α-Lactalbumin | rs402411249 | 11 | 33,379,161 | 1.75 | 5.77 |
α-Lactalbumin | rs401296484 | 11 | 33,733,902 | 0.97 | 5.51 |
α-Lactalbumin | rs425950097 | 11 | 34,091,412 | 0.98 | 4.43 |
α-Lactalbumin | rs420633999 | 11 | 34,146,282 | 0.88 | 5.38 |
α-Lactalbumin | rs424294429 | 11 | 34,239,169 | 0.58 | 4.53 |
Milk yield | rs402677421 | 15 | 7,078,006 | 0.14 | 5.82 |
C8:0 | rs405420878 | 17 | 51,422,515 | 0.24 | 5.79 |
C6:0 | rs405420878 | 17 | 51,422,515 | 0.27 | 5.60 |
C6:0 | rs410355614 | 17 | 52,959,387 | 0.28 | 5.30 |
α-Lactalbumin | rs426375102 | 20 | 21,580,756 | 0.05 | 4.75 |
α-Lactalbumin | rs409395180 | 24 | 6,819,203 | 0.07 | 4.39 |