Genetic architecture of acute hyperthermia resistance in juvenile rainbow trout (Oncorhynchus mykiss) and genetic correlations with production traits

Table 4 Effect and location of the QTL detected for acute hyperthermia resistance

QTL name	Chr	Peak SNP identifier	Peak SNP position (Mb)	LogBF	% variance explained by peak SNP	MAF	QTL region (Mb)	N of SNPs in QTL	% variance explained by QTL	N of genes in QTL region
TLE2-1	2	Affx-1237558532	78.97	6.05	0.03	0.34	[78.62–79.45]	160	0.63	8
TLE13-1	13	Affx-1237409861	36.68	11.95	1.13	0.42	[35.86–36.93]	317	4.60	35
TLE13-2	13	Affx-1237407727	45.63	6.66	0.04	0.46	[45.61–45.76]	66	0.20	9
TLE13-3	13	Affx-1237411204	47.37	6.24	0.02	0.24	[47.38–48.02]	205	0.40	25
TLE14-1	14	Affx-1237353641	42.93	10.05	0.25	0.31	[42.94–43.08]	15	0.37	4
TLE17-1	17	Affx-1248428573	20.73	8.15	0.07	0.21	[20.61–20.73]	13	0.11	1

Chr. Chromosome, Mb stands for mega-base-pair; % variance explained by peak SNP, % of genetic variance explained by the peak SNP; MAF, minor allele frequency; % variance explained by QTL, % of genetic variance explained by all the SNP included in the QTL region; N, number

ISSN: 1297-9686