Table 2 Single nucleotide polymorphisms that are significantly associated with carcass cut proportions detected in the single-trait genome-wide association studies

BBS

rs1501030

15

44,344,760

1.72E−05

TENM3

Within

BPS

rs0702610

7

97,615,897

9.33E−06

VRTN

Within

AB

rs0700767

7

30,100,555

1.37E−08

GRM4

78,750

HMGA1, NUDT3, GRM4

AB

rs0501169

5

66,142,277

2.19E−06

CCND2

27,706

AB

rs1705053

17

15,896,846

2.25E−05

BMP2

135,651

HAO1, BMP2

SB

rs1501163

15

50,915,343

5.05E−06

UNC5D

112,675

SC

rs0702610

7

97,615,897

2.76E−06

VRTN

Within

SC

rs0702516

7

121,223,217

2.01E−05

WARS1

Within

DLK1

SC

rs0201138

2

60,064,913

1.19E−05

MAP1S

35,048

LO

rs0501038

5

57,616,938

9.18E−06

ERP27

Within

BE

rs1806217

18

10,455,423

1.20E−05

UBN2

4168

BE

rs0200123

2

6,851,449

2.45E−05

SLC25A45

168

RI

rs0702610

7

97,615,897

4.18E−16

VRTN

Within

 VRTN

CB

rs0702038

7

97,618,073

6.94E−08

VRTN

Within

 VRTN

CB

rs1402627

14

125,929,866

2.77E−06

ATRNL1

Within

CB

rs1500252

15

9,945,936

1.24E−05

LRP1B

Within

CB

rs1705053

17

15,896,846

1.53E−05

BMP2

135,651

 BMP2

BF

rs1100173

11

9,429,262

8.14E−06

KL

Within

MC

rs0702610

7

97,615,897

4.47E−13

VRTN

Within

BL

rs1704784

17

2,382,922

7.70E−06

SGCZ

Within

TL

rs1303072

13

148,117,239

1.08E−05

CD96

Within

TL

rs0602330

6

123,281,566

2.04E−05

-

-

LB

rs1705079

17

16,788,523

2.67E−14

HAO1

Within

BMP2, BMP2

LB

rs0501167

5

66,103,958

5.84E−08

CCND2

Within

LB

rs0700777

7

30,235,367

3.80E−06

GRM4

Within

HMGA1, NUDT3, GRM4

LB

rs1300094

13

3,477,035

1.02E−05

RFTN1

Within

LC

rs1603764

16

32,867,067

1.58E−05

NDUFS4

7383

LC

rs1806864

18

42,102,045

2.00E−05

MINDY4

Within