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Table 1 Performance of the low-density SNP panels with the most significantly associated SNPs (TopLD strategy)

From: Potential of low-density genotype imputation for cost-efficient genomic selection for resistance to Flavobacterium columnare in rainbow trout (Oncorhynchus mykiss)

SNP density

Accuracy (mean ± sd)

Bias (mean ± sd)

300

0.62 ± 0.072

0.59 ± 0.078

500

0.66 ± 0.161

0.60 ± 0.143

700

0.63 ± 0.074

0.57 ± 0.079

1000

0.63 ± 0.074

0.56 ± 0.078

3000

0.64 ± 0.072

0.56 ± 0.074

5000

0.65 ± 0.074

0.57 ± 0.077

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Genetics Selection Evolution

ISSN: 1297-9686