Table 4 Significant SNPs for summarized shapes
From: Genetic analysis of geometric morphometric 3D visuals of French jumping horses
Shape number | Chromosome | Physical position (bp) | db SNP ID | Allele (Ref./Alt.) | MAF | Log (p-value)a |
|---|---|---|---|---|---|---|
1 | 19 | 50,554,884 | rs1137772803 | A/G | 0.50 | 5.83 |
2 | 19 | 35,110,857 | rs69216956 | A/G | 0.33 | 6.63 |
2 | 19 | 35,111,080 | rs69216958 | G/T | 0.33 | 6.64 |
3 | 1 | 144,952,487 | rs1151909758 | A/G | 0.07 | 5.67 |
4 | 3 | 107,272,714 | rs395965848 | G/A | 0.29 | 6.64 |
6 | 22 | 36,493,364 | rs395833721 | G/A | 0.48 | 5.49 |
9 | 1 | 15,716,473 | rs1149598923 | A/G | 0.08 | 5.86 |
9 | 1 | 66,305,171 | rs1148287010 | C/T | 0.17 | 5.58 |
9 | 28 | 40,962,032 | rs69354804 | C/T | 0.38 | 5.48 |
10 | 1 | 101,966,349 | rs68605628 | A/G | 0.06 | 5.71 |